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| 1 | | | Unleashed Informatics, Ltd. |
| | Oxford University Press | | EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus Hinxton |
| | Ariadne Genomics | | TimeLogic |
| | World Scientific Publishing Co., Inc. | | Hewlett-Packard |
| | Biosystems Informatics Institute | | GenomeWeb, LLC |
| | LION bioscience, Inc. | | Orion Multisystems |
| | Synamatix | | Gene Logic, Inc. |
| | RCSB Protein Data Bank | | CRC Press - Taylor & Francis Books, Inc. |
| | The MIT Press | | IBM |
| | Apple | | IBM |
| | Apple | | Sun Microsystems |
| | ISCB | | Sun Microsystems |
| | ISMB 2006 | | Cambridge University Press |
| | Wiley | | Springer |
| | Biobase Corporation | | The Math Works |
| | BioMed Central | | |
| | Partek | | Elsevier MDL |
| | Biomax Informatics AG | | ECCB 2005 - Madrid |
| | Univeristy of Michigan Bioinformatics Program | | The Blueprint Initiative |
| | Ocimum Biosolutions | | MCBI |
| | PubGene | | Public Library of Science |
| | Sun Microsystems | | Pfizer, Inc. |
| | IBM | | Apple Computer, Inc. |
| | Grand Valley State University | | PLoS CB |
| | Nature Publishing Group | | Nature Publishing Group |