8:35 AM - 8:40 AMSCANGEN: Introduction
8:40 AM - 9:00 AMIntegrated genetic and transcriptional analysis at the single-cell levelJean Fan, Harvard University, United States
9:00 AM - 9:20 AMDeterming the Mechanism of 5-Azacytidine Response in Myeloid Malignancies Using Single-cell DNA Methylation Sequencing Paired With Flow CytometryKieran O'Neill, The University of British Columbia, BC Cancer, Canada
9:20 AM - 9:40 AMMethods for Identifying Tumor Heterogeneity and Rare Subclones in Single Cell DNA Sequence DataSombeet Sahu, MissionBio, United States
9:40 AM - 10:15 AMCoffee Break
10:15 AM - 10:20 AMSCANGEN: Welcome Back
10:20 AM - 10:40 AMScalable Bayesian Tensor Factorization for single-cell GenomicsChristopher Yau, University of Birmingham and The Alan Turing Institute, United Kingdom
10:40 AM - 11:00 AMSTREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics dataHuidong Chen, Harvard Medical School, United States
11:00 AM - 11:20 AMLeveraging transcription factor networks to identify cell types from single-cell transcriptomesSahar Ansari, University of Michigan, United States
11:20 AM - 11:40 AMGranatum X: A community engaging and flexible scRNA-Seq analysis environment connecting tool developers to bench scientistsXun Zhu, University of Hawaii Cancer Center, United States
11:40 AM - 12:00 PMAn accurate and robust imputation method scImpute for single-cell RNA-seq dataWei Vivian Li, University of California, Los Angeles, United States
12:00 PM - 12:20 PMAn approach to studying clonal cell populations using bulk exome and single-cell RNA sequencing dataDavis McCarthy, EMBL-EBI
12:20 PM - 12:40 PMInferring Cancer Progression from Single Cell Sequencing while allowing loss of mutationsSimone Ciccolella, UniversitĂ  degli studi Milano Bicocca, Italy
12:40 PM - 2:00 PMLunch and SCANGEN Posters
2:00 PM - 2:20 PMTBCFlorian Markowetz, CRUK Cambridge Institute, United Kingdom
2:20 PM - 2:40 PMSPhyR: Tumor Phylogeny Estimation from Single-Cell Sequencing Data under Loss and ErrorMohammed El-Kebir, University of Illinois at Urbana-Champaign, United States
2:40 PM - 3:00 PMSingle-cell sequencing analysis of pancreatic cancer precursor lesions reveals convergent evolution and polyclonal originsVioleta Beleva Guthrie, Johns Hopkins University, United States
3:00 PM - 3:20 PMDeconvolution of tumor copy number data using bulk and single-cell sequencing dataHaoyun Lei, Carnegie Mellon University, United States
3:20 PM - 3:40 PMModelling tumour evolution from single-cell sequencing dataKatharina Jahn, ETH Zurich, Switzerland
3:40 PM - 4:00 PMRegulatory underpinnings of intra-tumor heterogeneity in HCC liver cancerBojan Losic, Icahn School of Medicine at Mount Sinai Hospital, United States
4:00 PM - 4:20 PMInvestigating Haematopoietic Stem Cells development by single cell sequencingSumon Ahmed, The University of Manchester, United Kingdom
4:20 PM - 4:40 PMA multitask learning approach for clustering multiple single cell RNA-seq datasetsRui Kuang, University of Minnesota Twin Cities, United States