Poster Session List
P01
Evolutionary Action is a unifying framework for assessing missense variant structures within and across phylaPresenting Author: Nicholas Abel, Baylor College of Medicinetop
P02
Discovering Subclones in Tumors Sequenced at Standard DepthsPresenting Author: Navid Ahmadinejad, Arizona State Universitytop
P03
Meta-analysis and Machine Learning Classification for Dilated Cardiomyopathy Using Cardiac Transcriptomics DataPresenting Author: Ahmad Alimadadi, Program in Bioinformatics and Department of Physiology and Pharmacology, University of Toledo College of Medicine and Life Sciencestop
P04
A web application for annotating tabular data with terms from biomedical ontologiesPresenting Author: Elizabeth Anderson, Brigham Young Universitytop
P05
Enabling structure-based data-driven selection of targets for cancer immunotherapyPresenting Author: Dinler Antunes, Rice Universitytop
P06
Abstract WithdrawnP07
Abstract WithdrawnP08
Pathway-Regularized Matrix FactorizationPresenting Author: Aaron Baker, University of Wisconsin-Madisontop
P09
“The Use of Machine Learning for Modeling a Clinical Decision Support for Predicting Postpartum Depression”Presenting Author: Houda Benlhabib, University of Washington, Biomedical Informatics and Medical Educationtop
P10
Bridging the Bioinformatics Knowledge Gap in the Pediatric Cancer Research Community with the Childhood Cancer Data Lab workshopsPresenting Author: Chante Bethell, Childhood Cancer Data Lab (Alex's Lemonade Stand Foundation)top
P11
Map and model — moving from observation to prediction in toxicogenomicsPresenting Author: Wibke Busch, Helmholtz Centre for Environmental Research - UFZtop
P12
Data Discovery Engine: A web-based toolset for maximizing data discoverability and promoting reusable data-sharing best practicesPresenting Author: Marco Cano, Scripps Researchtop
P13
A Machine Learning tool can assign function to phage proteinsPresenting Author: Vito Cantu, San Diego State Universitytop
P14
Identification of a lead compound for selective inhibition of Nav1.7 to treat chronic painPresenting Author: Sharat Chandra, Duke Universitytop
P15
Deep Learning based Multi-view model for deciphering gene regulatory keywordsPresenting Author: Pramod Bharadwaj Chandrashekar, Arizona State Universitytop
P16
Landmark and Cancer-Relevant Gene Selection of RNA Sequencing Data for Survival AnalysisPresenting Author: Carly Clayman, Penn State University - Great Valleytop
P17
Polygenic Risk Score Knowledge Base: A Web-based Application for Calculating Polygenic Risk ScoresPresenting Author: Matthew Cloward, Brigham Young Universitytop
P18
A comprehensive analysis of orthologous genes across all domains Presenting Author: Lauren Cutler, Brigham Young Universitytop
P19
Using Mendelian Randomization to Assess Disease Causality Presenting Author: Louisa Dayton, Brigham Young Universitytop
P20
Abstract WithdrawnP21
A Novel One-Class classification Approach to Accurately Predict Disease-Gene AssociationPresenting Author: Abdollah Dehzangi, Morgan State Universitytop
P22
Pipelines, Workflows and Virtualization to Build Institutional Informatics CapacityPresenting Author: Aaron Dickey, Unites States Department of Agriculturetop
P23
Transcriptional changes observed in a mouse contained infection model of TB identify human LTB+ individuals at low risk of progression to active disease.Presenting Author: Fergal Duffy, Seattle Children's Research Institutetop
P24
Apollo: an efficient tool to collaboratively refine and attribute genome-wide genomic annotationsPresenting Author: Nathan Dunn, University of California, Berkeleytop
P25
Global phylogeography and ancient evolution of the widespread human gut virus crAssphagePresenting Author: Robert Edwards, San Diego State Universitytop
P26
Urine pellet heterogeneity requires meticulous balancing of RNAseq librariesPresenting Author: Felix Eichinger, University of Michigantop
P27
Using Mutual Information to Validate Functional Interactions Between Clusterin and Amyloid Precursor ProteinPresenting Author: Austin Gale, Brigham Young Universitytop
P28
Computational Discovery of Novel Phages in the Human Gut MetagenomePresenting Author: Melissa Giluso, San Diego State Universitytop
P29
Benchmarking Viral Identification Tools in Complex Simulated Metagenomes Presenting Author: Cody Glickman, University of Colorado Anschutztop
P30
The design of an interactive lung map for studying premalignant lesions in the lung over timePresenting Author: Carsten Görg, Colorado School of Public Healthtop
P31
pipelineTools: RStudio based NGS workflow, reporting and teaching systemPresenting Author: Graham Hamilton, University of Glasgowtop
P32
Hetnet connectivity search provides rapid insights into how two biomedical entities are relatedPresenting Author: Daniel Himmelstein, University of Pennsylvaniatop
P33
CUBAP: An Interactive Web Portal for Analyzing Codon Usage Bias Across PopulationsPresenting Author: Matthew Hodgman, Brigham Young Universitytop
P34
Food Preservatives Induce Proteobacteria Dysbiosis in Human-Microbiota Associated Nod2-deficient MicePresenting Author: Tomas Hrncir, The Czech Academy of Sciencestop
P35
Predicting Clinical Dementia Rating Using Blood RNA LevelsPresenting Author: Erik Huckvale, Brigham Young Universitytop
P36
Polly Discover: Integration of public omics data and metadata using machine learning to enable asset discoveryPresenting Author: Brian Dranka, Elucidatatop
P37
Hypergraph Analytics for Computational VirologyPresenting Author: Cliff Joslyn, Pacific Northwest National Laboratorytop
P38
Analyzing the Signature of GPCR conformational ChangesPresenting Author: rafeed khleif, California State University Northridgetop
P39
HIGH RESOLUTION PROTEOMICS AND GENOMICS OF CNDP1 REPEAT VARIANTS LINKED TO DIABETIC NEPHROPATHYPresenting Author: Nicholas Kinney, Edward Via College of Osteopathic Medicinetop
P40
Combining the Evolutionary Trace Algorithm and Covariation Metrics Yields Improved Structural PredictionsPresenting Author: Daniel Konecki, Baylor College of Medicinetop
P41
Abstract WithdrawnP42
Expanding polygenic risk scores to include automatic genotype encodings and gene-gene interactionsPresenting Author: Trang Le, University of Pennsylvaniatop
P43
The impact of undesired technical variability on large-scale data compendiaPresenting Author: Alexandra Lee, Genomics and Computational Biology Graduate Program, University of Pennsylvania, Philadelphia, PA, USA; Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania,top
P44
Abstract WithdrawnP45
PyFBA: from Genomics to MetabolomicsPresenting Author: Shane Levi, San Diego State Universitytop
P46
Abstract WithdrawnP47
Effective Targeted Drug Prediction for Cancer Based on Genetic MutationsPresenting Author: Darsh Mandera, Jesuit High Schooltop
P48
Identifying Protein-Metabolite Networks associated with COPD PhenotypesPresenting Author: Emily Mastej, University of Colorado Anschutz Medical Campustop
P49
Identification of cell signaling pathways based on biochemical reaction kinetics repositoriesPresenting Author: Gustavo Matos, University of Sao Paulotop
P50
Using Ramp Sequences to Identify Causes of Disease AssociationPresenting Author: Lauren McKinnon, Brigham Young Universitytop
P51
Predicting progression-free interval for cancer patients based on heterogeneous combinations of high-throughput molecular dataPresenting Author: Nathan Mella, Brigham Young Universitytop
P52
Codon Usage Biases Have Significant Implications in Population StratificationPresenting Author: Taylor Meurs, Brigham Young Universitytop
P53
Containerized pipeline for the identification of compound heterozygous variants in triosPresenting Author: Dustin Miller, Brigham Young Universitytop
P54
Pathogenic Synonymous Variants Are More Likely to Affect Codon Usage Biases than Benign Synonymous VariantsPresenting Author: Justin Miller, Brigham Young Universitytop
P55
Filtering, classification, and selection of new knowledge for model assembly and extensionPresenting Author: Natasa Miskov-Zivanov, University of Pittsburghtop
P56
HiC-Pipeline: a Kepler and Spark-based scalable workflow for normalized contact map creationPresenting Author: Sanjay Nagaraj, Baylor College of Medicinetop
P57
Abstract WithdrawnP58
Robust discovery of causal gene networks via measurement error estimation and correctionPresenting Author: Manikandan Narayanan, Indian Institute of Technology Madrastop
P59
Reusing label functions to extract multiple types of relationships from biomedical abstracts at scalePresenting Author: David Nicholson, University of Pennsylvaniatop
P60
Model selection for clinical metabolomics: comparing the power of different optimization approaches for coronary artery disease diagnosis prediction.Presenting Author: Alena Orlenko, University of Pennsylvaniatop
P61
The Utility of Polygenic Risk Scores in High-risk PedigreesPresenting Author: Madeline Page, Brigham Young Universitytop
P62
Abstract WithdrawnP63
Medication Profiling through Tensor Factorization: A case study on commercial pharmacy claimsPresenting Author: Yubin Park, WithMe Health, Inc.top
P64
Evolutionary Action as a Tool for Quantifying Differentiation Across the Primate Family TreePresenting Author: Harley Peters, Baylor College of Medicinetop
P65
Assessing long-read correction and polishing strategies for genome assemblyPresenting Author: Brandon Pickett, Brigham Young Universitytop
P66
Abstract WithdrawnP67
Different Metabolic RNA Levels Exist in Alzheimer’s Disease BrainsPresenting Author: Karl Ringger, Brigham Young Universitytop
P68
EFFECT OF AN AXIALLY ORIENTED ELECTRIC DIPOLE MOMENT ON THE AMYLOID-ß(25-35) AGGREGATION AND CYTOTOXICITYPresenting Author: Eduardo Romero, university of central floridatop
P69
Deep learning enables in silico chemical-effect predictionPresenting Author: Jana Schor, Helmholtz Centre for Environmental Research - UFZtop
P70
An online end-to-end pipeline for virus phylogeography that leverages Natural Language Processing for finding host locations Presenting Author: Matthew Scotch, Arizona State Universitytop
P71
Open PBTA: Collaborative analysis of the Pediatric Brain Tumor AtlasPresenting Author: Joshua Shapiro, Childhood Cancer Data Lab (Alex's Lemonade Stand Foundation)top
P72
Technical Bias Correction of Sequencing Libraries Using Wavelet Transform Analysis and ClusteringPresenting Author: Rutendo Sigauke, Univeristy of Coloradotop
P73
geneHarmony: An Interactive Web Application that Automates the Manual Process of Bacteriophage Genome AnnotationPresenting Author: Erica Suh, Brigham Young Universitytop
P74
Natural Language Processing (NLP) in FDA Adverse Event Reporting System (FAERS) to Improve Extraction of Rare, Severe Adverse Drug Event-Product Pairs from Unstructured Data: Stevens - Johnson Syndrome and Toxic Epidermal Necrolysis (SJS/TEN) as an EPresenting Author: Katherine Sullivan, University of Colorado, Anschutz Medical Campustop
P75
MetaPro: A scalable and reproducible data processing and analysis pipeline for metatranscriptomic investigation of microbial communitiesPresenting Author: Billy Taj, Hospital for Sick Childrentop
P76
A review on multiple sequence alignment algorithmsPresenting Author: Alice Tan, White Oaks Secondary Schooltop
P77
Computational Analysis of Kinesin Mutations Implicated in Hereditary Spastic ParaplegiasPresenting Author: Shaolei Teng, Howard Universitytop
P78
A pan-cancer 3-gene signature to predict dormancy Presenting Author: Ivy Tran, Rutgers University - Camdentop
P79
Identifying optimal mouse models for human asthma using a novel modeling approachPresenting Author: Yihsuan Tsai, University of North Carolina at Chapel Hilltop
P80
Mitochondrial DNA Deletions and Copy Number in Whole Genome Sequencing (WGS) Data: Analyses of Aging and Parkinson’s Disease using Brain and BloodPresenting Author: David Tyrpak, University of Southern Californiatop
P82
Mondo Disease Ontology: harmonizing disease concepts around the worldPresenting Author: Nicole Vasilevsky, Oregon Health & Science Universitytop
P83
Giving credit where credit is due: How to make more meaningful connections between people and their roles, work, and impactPresenting Author: Nicole Vasilevsky, Oregon Health & Science Universitytop
P84
Leveraging Familial-based Relationships for Rare Variant DiscoveryPresenting Author: Liz Ward, Brigham Young Universitytop
P85
Identifying Functional Relationships Using Protein CoevolutionPresenting Author: Katrisa Ward, Brigham Young Universitytop
P86
Abstract WithdrawnP87
Optimizing storage and querying of massive biological datasets of a tabular naturePresenting Author: James Wengler, Brigham Young Universitytop
P88
Biotherapeutic Protein Immunogenicity Risk Assessment with TCProPresenting Author: Osman Yogurtcu, FDAtop
P89
Abstract WithdrawnP90
Structuring and crawling distributed biomedical metadata using schema.org standardPresenting Author: Xinghua Zhou, The Scripps Research Institutetop
P91
Cellular life from the three domains and viruses are transcriptionally active in a high-salt desert communityPresenting Author: Gherman Uritskiy, Johns Hopkinstop
