Conference Chairs
Bonnie Berger, Conference Co-chair, Massachusetts Institute of Technology, Cambridge, United States

Bonnie Berger, Professor of Applied Mathematics and Computer Science. Among the first algorithmic computer scientists to enter the field of computational molecular biology, making fundamental contributions to structural bioinformatics, viral shell assembly and mis-assembly, comparative genomics, protein networks, and theoretical models of protein folding. Played a major role in shaping these fields as a mentor to young researchers. Influenced many subareas of computational biology, largely via algorithmic insights; introduced probabilistic modeling to protein fold recognition; founded and developed conservation-based methods for comparative genomics; and solved a difficult theoretical problem central to the biophysics and protein folding communities. Showed how to globally align protein interaction networks using an eigenvalue formulation, and used these alignments to uncover functionally related proteins across model organisms. Recently invented “compressive genomics” and demonstrated that algorithms that compute directly on compressed data allow the analysis of genomic data sets to keep pace with data generation. Close collaborations with experimental biologists have guided her computational work and given it significant impact in the laboratory. Hundreds of biology labs rely on software she developed and made freely available. Member, American Academy of Arts and Sciences. Fellow, International Society for Computational Biology. Fellow, Association for Computing Machinery. Named one of Technology Review’s inaugural 100 Young Innovators of 1999. In 2011, selected to deliver the Margaret Pittman Director’s Lecture at the National Institutes of Health.
Website: http://people.csail.mit.edu/bab/

Her research interests include analysis of ancient genomes, primate comparative genomics and gene expression and the development and application of ontologies for biomedical applications. Her group uses computational approaches to gain insights into genome evolution in primates and have a special interest in the development of novel software for processing and analysis of high-throughput sequence data.
Janet received her PhD in bioinformatics from the South African National Bioinformatics Institute at the University of the Western Cape under the supervision of Professor Winston Hide working on an ontology for classifying gene expression data for which she won the L'Oreal women in science fellowship. She is author of more than 50 peer-reviewed scientific publications. Together with Alfonso Valencia, Janet is the co-Editor-in-chief of the journal Bioinformatics, and also an editor of the journal Database. She is an active member of the Board of the International Society of Computational Biology and has held the positions of both Vice-president and secretary of the society.
Website: http://www.eva.mpg.de/genetics/bioinformatics/overview.html
Committees
Steering Committee
Scientific Committee
Art & Science
Highlights Committee
Late Breaking Research Committee
Proceedings Committee
Poster Committee
Student Council Symposium
Special Sessions Committee
Technology Track
Travel Fellowship
Workshops Committee
Steering Committee
Bonnie Berger, Conference Co-chair, Massachusetts Institute of Technology, Cambridge, United States
Janet Kelso, Conference Co-chair, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
Paul Horton, ISCB Conferences Committee Chair, AIST, Computational Biology Research Center, Japan
Diane E. Kovats, ISCB Executive Director, Fairfax, Virginia, United States
Steven Leard, ISCB Conferences Director, Edmonton, Canada
Burkhard Rost, Highlights Chair, Technical University Munich, Germany
Reinhard Schneider, ISCB Treasurer, University of Luxembourg
Scientific Organizing Committee
Art and Science Chair: Milana Frenkel-Morgenstern, Chair, Spanish National Cancer Research Centre (CNIO), Spain
Highlights Track Co-chairs: Burkhard Rost, Technical University Munich, Germany &
Reinhard Schneider, ISCB Treasurer, University of Luxembourg
Late Breaking Research Track Co-chair: Dana Pe’er, Columbia University, United States &
Ioannis Xenarios, Co-Chair, University of Lausanne, Switzerland
Posters Chair: Yana Bromberg, Rutgers, The State University of New Jersey, United States
Proceedings Co-chair: Serafim Batzoglou, Stanford, United States &
Russell Schwartz, Carnegie Mellon University, United States
Scheduling Chair: Dietlind Gerloff, Foundation for Applied Molecular Evolution (FfAME), United States
Special Interest Groups Chair: Alan Christoffels, University of Western Cape, South Africa
Special Sessions Chair: Donna Slonim, Tufts University, United States
Technology Track Chair: Rodrigo Lopez, European Bioinformatics Institute, United Kingdom
Travel Fellowships Chair: Guilherme Oliveira, FIOCRUZ- Minas, Brazil
Tutorials Chair: Fran Lewitter, Whitehead Institute of Biomedical Research, United States
Workshops Track Chair: Christine Orengo, University College London, United Kingdom
Reinhard Schneider, Committee Co-Chair, University of Luxembourg
Nir Ben-Tal, Tel-Aviv University, Israel
Bonnie Berger, Massachusetts Institute of Technology, Cambridge, United States
Eric Bongcam-Rudloff, Uppsala University, Sweden
Terry Gaasterland, University of California, San Diego, United States
Yanay Ofran, Bar Ilan University, Ramat-Gan, Israel
Paul Horton, Computational Biology Research Center, AIST, Japan
Marciel Kann, University of Maryland, Baltimore County, United States
Toni Kazic, University of Missouri, Columbia, United States
Janet Kelso, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
Stefan Kramer, Technical University Munich, Germany
Michal Linial, The Hebrew University of Jerusalem, Israel
Predrag Radivojac, Indiana University, United States
Donna Slonim, Tufts University, Medford, United States
Dana Pe'er, Co-chair, Columbia University, United States
Uri David Akavia, McGill University, Montreal, Canada
Julien Gagneur, Ludwig Maximilian University of Munich, Germany
Winston Hide, Harvard School of Public Health, United States
Curtis Huttenhower, Harvard School of Public Health, United States
Anshul Kundaje, Stanford University, United States
Su-In Lee, University of Washington, United States
Predrag Radivojac, Indiana University, United States
Oliver Stegle, EBI, United Kingdom
Olga Vitek, Purdue University, United States
Chaolin Zhang, Columbia University, United States
Yong Zhang, Tongji University, China
Theodore Alexandrov, University of Bremen, Germany
Hannah Carter, Johns Hopkins University, United States
Juan Miguel Cejuela, Technical University Munich, Germany
Tatyana Goldberg, Technical University Munich, Germany
Anna Goldberg, University of Toronto, Canada
Edda Kloppmann, Technical University Munich, Germany
Hande Küçük, University of Miami, United States
Weijun Luo, University of North Carolina, United States
Geoff Macintyre, University of Melbourne, Australia
Venkata P. Satagopam, University of Luxembourg, Luxembourg
Jonas Reeb, Technical University Munich, Germany
Yan Zhang, Yale University, New Haven, United States
Chengsheng Zhu, Rutgers, The State University of New Jersey, United States
Proceedings
Serafim Batzoglu, Stanford University, United States
Russell Schwartz,Carnegie Mellon University, Pittsburgh, United States
Thomas Lengauer, Max Planck Institute for Informatics, Saarbucken, Germany
Lenore Cowan, Tufts University, Medford, United States
Area Committee Members Show | Hide
Davide Bau Asa Ben-Hur Mathieu Blanchette Guillaume Bourque Jeremy Buhler Kevin Cohen Lenore Cowen Noah Daniels Susmita Datta Ron Do Dannie Durand Nadia El-Mabrouk Oliver Eulenstein Sampsa Hautaniemi Heng Huang Curtis Huttenhower |
Simon Kasif Carl Kingsford Adam Kowalczyk Martin Krallinger Thomas Lengauer Ulf Leser Stan Letovsky Jennifer Listgarten Po-Ru Loh Stefano Lonardi Chad Myers William Stafford Noble Bogdan Pasaniuc Nico Pfeifer Mihai Pop Mattia Prosperi Teresa Przytycka |
Gunnar Rätsch Dietrich Rebholz-Schuhmann Ivo Sbalzarini Sven-Eric Schelhorn Marcel Schulz Johannes Söding Jens Stoye Glenn Tesler Fabio Vandin Karin Verspoor Jean-Phillippe Vert Christian von Mering Amy Williams Yu Xia Itai Yanai Ralf Zimmer |
Robert Murphy, Carnegie Mellon University, Pittsburgh, United States
Area Committee Members Show | Hide
Scott Acton Anne Carpenter Gaudenz Danuser Cris Luengo |
Erik Meijering Torsten Möller Robert Murphy James T. Robinson |
Olaf Ronneberger Ivo Sbalzarini Carolina Wählby Thomas Walter |
Databases, Ontologies, & Text Mining
Hagit Shatkay, University of Delaware, Newark, United States
Alex Bateman, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, United Kingdom
Area Committee Members Show | Hide
Alan Aronson Chris Baker Alex Bateman Olivier Bodenreider Kevin Cohen Aaron Cohen Nigel Collier Dina Demner-Fushman Juliane Fluck |
Michael Galperin Lars Juhl Jensen Halil Kilicoglu Jung-Jae Kim Maria Liakata Jinchu Luo Kenta Nakai Francis Ouellette |
Dietrich Rebholz-Schuhmann Michael Schroeder Nigam Shah Hagit Shatkay Neil Smalheiser Padmini Srinivasan Karin Verspoor Lana Yeganova |
Disease Models & Epidemiology
Simon Kasif, Boston University, United States
David Heckerman, Microsoft Research, Los Angeles, United States
Area Committee Members Show | Hide
Hector Corrada Bravo Jonathan Dreyfuss Clark Freifeld Dan Geiger Anthony Gitter David Heckerman Nebojsa Jojic |
Simon Kasif Kirill Korolev Stan Letovsky Manway Liu Bud Mishra Pier Palamara Bogdan Pasaniuc |
Nico Pfeifer Hoifung Poon Snehit Prabhu Michael Schroeder Tandy Warnow Omer Weissbrod Or Zuk |
Evolution and Comparative Genomics
Bernard Moret, Swiss Federal Institute of Technology, Lausanne, Switzerland
Tandy Warnow, University of Texas at Austin, United States
Area Committee Members Show | Hide
Mathieu Blanchette Bastien Boussau Daniel Brown Miklos Csuros Colin Dewey Dannie Durand Nadia El-Mabrouk Steve Evans Richard Goldstein |
Sridhar Hannenhalli Barbara Holland Junhyong Kim Jim Leebens-Mack Yu Lin Bernard Moret Luay Nakhleh Mark Pagel Mihai Pop |
Ben Raphael Sebastien Roch Marie-France Sagot David Sankoff Saurabh Sinha Jens Stoye Glenn Tesler Tandy Warnow Shibu Yooseph |
Gene Regulation & Transcriptomics
Alexander Hartemink, Duke University, Durham, United States
Zohar Yakhini, Agilent, Haifa, Israel
Area Committee Members Show | Hide
Yoseph Barash Takis Benos Richard Bonneau Guillaume Bourque Alan Boyle Michael Brent Susmita Datta Olof Emanuelsson Jason Ernst Brendan Frey David Gifford Raluca Gordân Michael Hallett Alexander Hartemink Sampsa Hautaniemi Haiyan Huang |
Wolfgang Huber Tim Hughes Tommy Kaplan Ole Christian Lingjærde Doron Lipson David MacAlpine Shaun Mahony Alexandre Morozov Elena Nabieva Leelavati Narlikar Uwe Ohler Yuan Qi Jiang Qian Ben Raphael Markus Ringnér |
David Rocke Nathan Sheffield Saurabh Sinha Rainer Spang Israel Steinfeld Gary Stormo Joshua Stuart Amos Tanay Koji Tsuda Alfonso Valencia Yu Xia Zohar Yakhini Yinyin Yuan Michael Zhang Deyou Zheng |
Mass Spectrometry & Proteomics
Olga Vitek, Pardue University, West Lafayette, United States
Bill Noble, University of Washington, Seattle, United States
Area Committee Members Show | Hide
Sebastian Böcker Manfred Claassen David Fenyo Lukas Käll Sangtae Kim |
Lennart Martens Alexey Nesvizhskii William Stafford Noble Olga VitekLennart Martens Alexey Nesvizhskii William Stafford Noble |
Olga Vitek Christian Von Mering Bobbie-Jo Webb-Robertson Daniela Witten |
Metabolic Networks
Hal Alper Leonid Chindelevitch Paul Jensen |
Christoph Kaleta Peter Karp Jason Papin |
Isabel Rocha Ryan Senger Tomer Shlomi |
Population Genomics
Itsik Pe'er, Columbia University, New York, United States
Can Alkan Alexis Battle Karsten Borgwardt Liran Carmel Yixuan Chen Paul de Bakker Ron Do Eran Halperin |
Dan He Sepp Hochreiter Iuliana Ionita-Laza Eric Jorgensen Hyun Min Kang Bonnie Kirkpatrick Adam Kowalczyk Jose A. Lozano |
Bogdan Pasaniuc Itsik Pe’er Alkes Price Soumya Raychaudhuri Laura Scott Noah Zaitlen Eleftheria Zeggini |
Protein Interact & Molecular Networks
Trey Ideker, UC San Diego, United States
Patrick Aloy Ziv Bar-Joseph Anastasia Baryshnikova Asa Ben-Hur Andreas Beyer Juan Fernandez-Recio Alfredo Ferro Dario Ghersi Casey Greene Henning Hermiakob Charlie Hodgman Trey Ideker |
Igor Jurisica Tamer Kahveci Carl Kingsford Mehmet Koyuturk Rui Kuang Hans-Peter Lenhof Tijana Milenkovic T.M. Murali Chad Myers Florencio Pazos Matteo Pellegrini Natasa Przulj |
Teresa Przytycka Ben Raphael Denish Scholtens Benno Schwikowski Ron Shamir Mona Singh Denis Thieffry Jean-Philippe Vert Esti Yeger-Lotem Hongyu Zhao Elena Zotenko |
Protein Structure & Function
Jinbo Xu, Toyota Technical Institute, Chicago, United States
Chris Bailey-Kellogg Jadwiga Bienkowska Philip Bradley Rita Casadio Brian Chen Thomas Dandekar Bhaskar Dasgupta Charlotte Deane Bruce Donald Arne Elofsson Andras Fiser Julian Gough Turkan Haliloglu |
Liisa Holm Ozlem Keskin Daisuke Kihara Rachel Kolodny Christopher Langmead Keren Lasker Yaohang Li Jie Liang Ryan Lilien Julie Mitchell Vikas Nanda Avner Schlessinger Yang Shen |
Erik Sonnhammer Maya Topf Silvio Tosatto Vladimir Uversky Bjorn Wallner Yusu Wang Haim J. Wolfson Yu Xia Dong Xu Jinbo Xu Jinfeng Zhang Yaoqi Zhou |
RNA Bioinformatics
Jerome Waldispuhl, McGill University, Montreal, Canada
Rolf Backofen Danny Barash Peter Clote Manual Garber Paul Gardner Robert Giegerich |
Ivo Hofacker Fabrice Jossinet David Mathews Yann Ponty Elena Rivas Igor Ulitsky |
Jerome Waldispuhl Zasha Weinberg Eric Westhof Mihaela Zavolan Michal Ziv-Ukelson |
Sequence Analysis
Michael Brudno, University of Toronto, Canada
Tatsuya Akutsu Can Alkan Alberto Apostolico Vikas Bansal Ali Bashir Mathieu Blanchette C.Titus Brown Michael Brudno Jeremy Buhler Francis Chin Hector Corrada Bravo |
Martin Ester Fereydoun Hormozdiari Tamer Kahveci John Kececiogu Sun Kim Stefano Lonardi Ion Mandoiu Paul Medvedev Ivan Ovcharenko Knut Reinert Cenk Sahinalp |
Michael Schatz Alexander Schliep Alexander Schoenhuth Jared Simpson Jens Stoye Haixu Tang Glenn Tesler Jerome Waldispuhl S.M. Yiu Alex Zelikovsky Daniel Zerbino |
Special Session Committee
Donna Slonim, Tufts University, Medford, United States
University of Colorado School of Medicine, Denver United States
Ioannis Xenarios, Chair, University of Lausanne, Switzerland
Mona Singh, Princeton University, United States
Student Council Symposium
Farzana Rahman, Chair, University of South Wales, United KingdomTomas Di Domenico, Co-chair, University of Padua, Italy
Lounnas Bilal, Communications
Dan DeBlasio, Web Chair, University of Arizona, United States
Vignesh G P, Communications
Mehedi Hassan, Communications, Web, University of South Wales, United Kingdom
Annika Jacobsen, Communications Chair, VU University, Netherlands
Himanshu Joshi, Finance, University in Olso, Norway
Alexander Junge, Travel Fellowships Chair and Program, University of Copenhagen, Denmark
Pieter Meysman, Web, University of Antwerp, Belgium
Gonzalo Parra, Program, Buenos Aires University, Argentina
Joe Perez-Rogers, Social Event
Sayane Shomez, Program, Vellore Institute of Technology, India
Esmeralda Vicedo, Finances Chair, Technical University Munich, Germany
Katie Wilkins, Program chair, Cornell University, United States
Technology Track
Rodrigo Lopez, Chair, European Bioinformatics Institute, Cambridge, United Kingdom
Christophe Blanchet, National Centre for Scientific Research, Lyon, France
Des Higgins, University College Dublin, Ireland
Lonnie Welsh, University of Ohio, United States
William Pearson, University of Virginia School of Medicine, United States
Johannes Soeding, Ludwig-Maximilian, University of Munich, Germany
Travel Fellowships
Guilherme Oliveira, Chair, FIOCRUZ, Belo Horizonte, Brazil
Joe Arrais, University of Coimbra, Portugal
Appolinaire Djikeng, International Livestock Research Institute, Kenya
Daniel Hurley, University of New Zealand, New Zealand
Francisco Lobo, EMBRAPA, Brazil
Ulisses de Mendonca Brago-Neto, Texas A & M University, United States
Tutorials Committee
Fran Lewitter, Chair, Whitehead Institute of Biomedical Research, Cambridge, United States
topWorkshop Committee
Christine Orengo, Committee Chair, University College London, United Kingdom
Janet Kelso, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
Predrag Radivojac, Indiana University, Bloomington, United States