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2016 Whole-Cell Modeling Summer School
Spain - Barcelona

Hosted by: Center for Regulatory Genomics
Venue: Center for Regulatory Genomics
Dates: Apr 03, 2016 through Apr 08, 2016

Event Registration: 2015-09-01 through 2015-12-15
 
Description
 
Whole-cell models are promising tools for predicting phenotype from genotype by accounting for every individual gene and cell function. Whole-cell modeling has the potential to enable rational bioengineering and precision medicine. However, significant work remains to develop fully complete and accurate whole-cell models. The goal of the 2016 Whole-Cell Modeling Summer School is to provide young investigators cutting-edge training in large-scale dynamical modeling and model integration.

Why participate?
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The course will be the first course focused on multi-algorithm whole-cell modeling. It will teach strategies for building and managing large models which aren’t covered by any other course including multi-algorithm modeling, model organism database curation, surrogate modeling, and software development. The five-day course will feature didactic lectures, interactive hands-on tutorials, and student research talks. The mornings will feature lectures on modeling individual pathways. The afternoons will feature interactive hands-on tutorials on building and analyzing multi-algorithm models to generate and evaluate hypotheses. Throughout the course, students will work toward building a small whole-cell model. In addition, the course will include student talks to enable students to share their own research.

Who is the course for?
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The course is designed for PhD students and postdoctoral scholars who wish to gain training in large-scale dynamical modeling. Students should already have a strong foundation in computational systems biology including dynamical modeling and scientific programming. See the pre-requesites section below for more information.

Speakers
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Javier Carrera, Stanford University
James Faeder, University of Pittsburgh
Tim Gardner, Riffyn
Anne Claude Gavin, EMBL Heidelberg
Peter Karp, SRI
Jonathan Karr, Icahn School of Medicine at Mount Sinai
Edda Klipp, Humboldt University of Berlin
Maria Lluch-Senar, Center for Regulatory Genomics
Julio Saez-Rodriguez, European Bioinformatics Institute
Luis Serrano, Center for Regulatory Genomics
Ian Stansfield, University of Aberdeen
Jörg Stelling, ETH Zürich
Bas Teusink, VU University Amsterdam
Barbara Di Ventura, University of Heidelberg

Important dates
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Application due: December 15, 2015
Notification of application decision: December 2015
Oral presentation submission: Winter 2016
Notification of oral presentation decision: Winter 2016
Summer school: April 3-8, 2016

How to apply
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The online application (http://apps.crg.es/content/internet/events/webforms/13960) is due December 15, 2015. The application asks for brief descriptions of why you want to participate in the course, your background, and your current research, as well as your CV.
 
Additional Information
 
Event URL: http://www.wholecell.org/school-2016
ISCB Member Discount: None
Contact Person: Elias Bechara ([javascript protected email address])

While ISCB provides for conference and event listings that may be of interest to members and bioinformaticians at large, ISCB is not responsible for the content provided by outside sources. Such listings are not meant as an endorsement by ISCB.



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