KEY DATES

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ABOUT GEORGE MASON UNIVERSITY

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CODE OF CONDUCT

ISCB Conferences

The International Society for Computational Biology, Inc. (ISCB) assumes that most people are intelligent and well-intended, and we're not inclined to tell people what to do. However, we want every ISCB conference to be a safe and productive environment for everyone. Attendees should respect common sense rules for public behavior, personal interaction, common courtesy, and respect for private property.

ISCB doesn’t condone harassment or offensive behavior, at our conference venues or anywhere. It's counter to our organization values. More importantly, it's counter to our values as human beings.

Abusive, racist, sexist, harassing, or threatening behavior towards any other participant or directed at any organizer, student volunteer, ISCB staff, convention center staff, or security will not be tolerated.

We invite you to help us make each ISCB conference a place that is welcoming and respectful to all participants, regardless of race, gender, age, sexual orientation, disability, physical appearance, national origin, ethnicity, or religion. This allows everyone the opportunity to focus on the conference itself, and the great networking and community richness that happens when we get together in person. Please report any incidents in which an attendee of the meeting is abusive, insulting, intimidating, bothersome, or acting in an unsafe or illegal manner to ISCB staff or security immediately.

We expect all participants to follow the Code of Conduct during the conference. This includes conference-related social events at off-site locations, and in related online communities and social media. Participants asked to stop any harassing behavior are expected to comply immediately. Conference participants violating this Code of Conduct may be expelled from the conference without a refund.

Please bring any concerns to the immediate attention of the event staff, or contact our Executive Director, Diane Kovats, at This email address is being protected from spambots. You need JavaScript enabled to view it.. We thank our participants for your help in keeping the event welcoming, respectful, and friendly to all participants.

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PROMOTION

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COMMITTEE

• Keith Crandall, George Washington University
• Riya Dabbi, Thomas Jefferson High School for Science and Technology
• Bel Hanson, ISCB
• Adam Lee, University of Maryland
• Diane Kovats, ISCB
• Lauren Quattrochi, MITRE
• Kamaljeet Sanghera, George Mason University
• Iosif Vaisman, George Mason University

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SPONSORSHIP OPPORTUNITIES

The International Society for Computational Biology (ISCB) in partnership with George Mason University, is hosting the second annual the Youth Bioinformatics Symposium (YBS), Exploring Computational Biology Winter 2019.

In 2016 nearly 100 students from the greater Washington DC area gathered for this event. This engaging one-day event introduces students to the amazing world of computational biology, allowing them to engage with and learn about popular tools used in research in our hands-on workshop, as well as inform them of the many career areas in whcih bioinformatics is now appearing. ISCB is seeking sponsorship for the 2019 YBS at any contributable amount.  Supporters of the conference will be recognized during the event as well as in post event articles.

RECOMMENDED SPONSORSHIP LEVEL AND BENEFITS

• Logo prominently displayed on symposium website under highest level sponsorship
• Logo on signage at event
• Logo on event re-cap article in ISCB Newsletter
• Recognition in ISCB annual report for support of the event with logo
• Opportunity to present science award prize
• Organization recognized as travel fellowship donor
  

• Logo displayed on symposium website under silver level sponsorship
• Logo on signage at event
• Logo on event re-cap article in ISCB Newsletter
• Recognition in ISCB annual report for support of the event
• Opportunity to present science award prize
  

• Logo displayed on symposium website under bronze level sponsorship
• Logo on signage at event
• Logo on event re-cap article in ISCB newsletter
• Recognition in ISCB annual report for support of the event
  

• Organization listed on conference website
• Organization listed on signage at event
• Recognition in ISCB annual report
  

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SCIENCE FAIR

The purpose of the mini science fair is to allow middle and high school students to think creatively, conduct background research, and develop a proposal for a unique solution that can help address important problems that face the public health and medical fields. Through this process, students will be able to think like scientists, apply technologies to pressing global health issues, and learn how to make existing technologies even better.

Theme of the Mini Science Fair:
The theme for this year’s youth symposium is Precision Health. This area is broad to allow students room to explore their own interests and see how computational and engineering methods can be applied to global health issues.

Examples of areas in Precision Health include:

• Infectious Disease (malaria, ebola, tuberculosis, etc.)
• List of well-known infectious diseases - www.health.ri.gov/diseases/infectious/
• Genetic Disease (cancer, Huntington’s diseases, Parkinsons, etc.)
• List of well-known genetic diseases - www.genome.gov/10001204
• Combating World Hunger

Before the Symposium:
Students will be able to form teams to help brainstorm and think of ideas. A few weeks before the symposium, the team will submit a brief abstract of their proposal. The abstract submission will take place on the symposium website.

The Symposium organizer will have research scientists available to help guide the teams.

During the Symposium:
At the symposium, there will be a time when teams will give poster presentations to various visitors at the symposium (family and friends) and will also present their idea to judges. The judges will score and determine the top projects, who will receive an award at the closing ceremonies.

Presentation Details:
At the science fair, individuals or teams can present their project in a variety of ways. The different options include a trifold poster board, powerpoint presentation on a laptop, or even printed out images and notes as a supplement. Presenters are not required to have a trifold poster board, and can instead determine what presentation method is best for them. The symposium organizers will provide a table for each project at the science fair.

Judging Criteria:

--> Click here for a PDF of this rubric.

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PANEL

Our live panel discussion will talk about the paths of our panel members, students and professionals, in Bioinformatics and Computational Biology. Prepare to hear offered opinions and responses to questions about university and career choices.

--> Submit your own question here. <--

MODERATOR
	Lauren Quattrochi, , MA, MA, PhD NIH Senior Neuroscience Informaticist Clinical Quality Informatics Dr. Lauren Quattrochi is a Senior Neuroscience Informaticist at MITRE, who seeks to empower the scientific community through accelerating biomedical research funding opportunities. Dr. Quattrochi has a diverse background ranging from experiences in the pharmaceutical industry, non-profits and government-funded entities - which she integrates to identify systemic research gaps and challenges. She obtained her doctorate from Brown University, where she discovered a novel type of ganglion photoreceptor - the M6 cell. Prior to MITRE, Dr. Quattrochi directed a national initiative to align the interests of the public with the medical community in clinical trial publication bias and design, as well as facilitating evidence-based advancements at Sense About Science USA.
PANELISTS
	Keylie Gibson Ph.D. Student George Washington University I attended the University of Central Oklahoma for my undergraduate degree where I earned a B.S. in Forensic Science – Molecular Biology and a B.S. in Biology with a minor in chemistry. I am currently a first year in the Ph.D. program in Biological Sciences at George Washington University and am advised in the Computation Biology Institute. I am broadly interested in population genetics, bioinformatics, and molecular biology and evolution related to infectious diseases, forensic science, and Monarch butterflies. I am also interested in biological anthropology and applying computational biology approaches to the social sciences. Outside of science, I enjoy baking and being outdoors, and I am an avid movie goer.
	V. Keith Hughitt Post-doctoral Fellow Laboratory of Cancer Biology and Genetics (LCBG), NIH/NCI Dr. Keith Hughitt is a Cancer Research Training Award (CRTA) research fellow working in the lab of Dr. Bevery Mock at NIH/NCI.  His current research efforts are focused on the development of novel approaches for the integrative analysis of large-scale drug screen and molecular profiling datasets, in order to detect biomarkers related to patient response to drug treatment. Other interests include open and reproducible research methods and efficient software engineering approaches for the sciences. Prior to graduate studies at UMD, Keith spent close to five years working on visualization and data analysis problems in the solar physics division at NASA Goddard Space Flight Center in Greenbelt, MD.
	Eldred A. Ribeiro, Ph. D Healthcare Systems, Principal MITRE Dr. Eldred Ribeiro is interested in solving complex problems in Healthcare and Clinical Research by leveraging interdisciplinary scientific knowledge and information technology. Prior to joining MITRE, he served as the data manager on the Biomedical Translational Research Information System (BTRIS), utilized by the National Institutes of Health to aggregate patient information used in Clinical Trials. While serving for nearly a decade as an R&D scientist at Bio-Rad Laboratories (California), Eldred was instrumental in the design of many recognition and signal processing algorithms, biotechnology applications and instruments for use in Genomics and Proteomics research. His interest in bioinformatics and biotechnology instrumentation was fueled during his post-doctoral work at Brookhaven National Laboratory (New York) where he developed computer analysis for DNA electrophoresis patterns used in sequencing and mapping during the Human Genome Project. During the seminal years of the use of DNA Profiling to establish identity for forensic purposes, Eldred served as an expert scientific witness in the California court system. Eldred has a Doctorate in Physics from Clemson University, where he developed biophysical techniques for quantifying UV-induced damage to DNA using gel electrophoresis. He is a National Science Talent Scholar, with a Masters in Physics from the Indian Institute of Technology. Eldred advocates instilling STEM interest in youth by conducting seminars in biomedical topics for high school students and by serving as a judge in science fairs at the regional, state, and international levels.
	Dr. Amarda Shehu Professor Department of Computer Science George Mason University Fairfax, VA Dr. Amarda Shehu is an Associate Professor in the Department of Computer Science at George Mason University. She holds affiliated appointments in the School of Systems Biology and the Department of Bioengineering at George Mason University. She received her B.S. in Computer Science and Mathematics from Clarkson University in Potsdam, NY in 2002 and her Ph.D. in Computer Science from Rice University in Houston, TX in 2008, where she was an NIH fellow of the Nanobiology Training Program of the Gulf Coast Consortia. Shehu's research contributions are in computational structural biology, biophysics, and bioinformatics with a focus on issues concerning the relationship between sequence, structure, dynamics, and function in biological molecules. Her research on probabilistic search and optimization algorithms for protein structure modeling is supported by various NSF programs, including Intelligent Information Systems, Computing Core Foundations, and Software Infrastructure. Shehu is also the recipient of an NSF CAREER award and two Jeffress Memorial Trust Awards.
	Nick Weber Lead, Translational Bioinformatics Program NIAID OCICB Bioinformatics and Computational Biosciences Branch (BCBB) Rockville, MD Since 2009, Nick Weber has served as an intern, analyst, project manager, product owner, and program lead at the National Institutes of Health. He has a passion for leading “learning teams” that strive to deliver novel, useful, and sustainable applications and databases for the global scientific research community. Nick applies his interdisciplinary education in science, technology, and management to innovative projects that include Nephele, a platform for enabling scalable and standardized microbiome data analysis using the Amazon cloud, and the NIH 3D Print Exchange, a toolkit and repository for creating and sharing 3D-printable models for biomedicine.

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WORKSHOPS

Neuroscience Workshop
Room 326

The workshop will introduce the central nervous system encompassing the brain and spinal cord and the function of the brain. The three parts of the brain, cerebrum, cerebellum and brain stem will be explained. The division of brain into two cerebral hemispheres with four lobes encompassing the hemispheres, occipital, temporal, parietal and frontal lobes and each lobe’s function will be introduced. Brain cells or Neurons, their important parts such as the axon, dendrites will be introduced along with their function and biological neural networks. A hands on activity of building a physical model of the brain and the neuron will be conducted. Scientific software, Sci-kit will be utilized to model action potentials of the neuron. Topics will also cover Neurodegenerative diseases and tumors of the brain and how medical imaging is helping in diagnosis and treatment of these.

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Artificial Intelligence and Machine Learning Models in Bioinformatics
Room 327

The workshop will focus on various problems in bioinformatics and computational biology which can be solved using artificial intelligence and machine learning models. An overview of several such problems will be presented and one of them will be used as a practical example. The students will learn the basics of creating a training set to build the model and a test set to validate the model. Weka, an open source machine learning program, will be used to generate predictive models using different machine learning algorithms and analyze the models' performance.

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Biomedical Bioinformatics Workshop
Room 223

Biomedical research primarily focuses on the biology of human health and disease and ranges from human biology to more specialized areas such as human genomics, human genetics, human physiology, and human nutrition. We will begin the journey with an experimental expressed sequence tag (EST) obtained from a patient. EST is a short sub-sequence of a cDNA sequence. In general, ESTs may be used to identify gene transcripts, and are instrumental in gene discovery and determination. We continue to identify candidate genes expressing them, and to determine matching exon-intron structures. We will then identify a disease gene contributing to the disease phenotype using the human genome browser.

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Whodunit? Forensics with DNA & Bioinformatics Workshop
Room 222

The workshop will analyze DNA sequence data to identify the gene(s) involved and identify the context of the samples by linking to PubMed records. You will analyze DNA sequence data using local alignment, global alignment, multiple sequence alignment tools and then use your multiple sequence alignment to estimation evolutionary (phylogenetic) relationships amongst the sequences.  With the phylogeny in hand, you will then solve the forensic mystery and decide if the accused is innocent or guilty of an alleged crime. You will gain experience using a diversity of open-access tools that are all available online.

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WORKSHOPS & PANEL

• Workshops
• Panel

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