POSTER PRESENTATIONS
Poster Session A - Tuesday, 12:00 pm - 1:30 pm, with lunch
Location: Illinois A
Poster Session B - Wednesday, 12:00 pm - 1:30 pm, with lunch
Location: Illinois A
Presenters:
- If you are in Session A, you may set up your poster any time between 8:30 am and Noon on Tuesday and must remove your poster by 5pm on Tuesday. All remaining posters will be discarded.
- If you are in Session B, you may set up your poster any time between 8:30 am and Noon on Wednesday and must remove your poster by 5pm on Wednesday. All remaining posters will be discarded.
As of April 18, 2017. Subject to change without notice.
AUTHORS | TITLE | BOARD # | SESSION |
Yadi Zhou and Michael Held | Bridging Experimental Biochemistry and Bioinformatics through a Component-based Visual Bioinformatics Pipeline Software | 1 | A |
Nihal Babu | BIOINFORMATICS VISUALIZATION: A Review on a novel technique used in the INTERACTORIUM | 2 | B |
Rosa Aghdam | Preserving Significant Genes and Pathways via different Imputation Methods | 3 | A |
Moamen Elmassry, Nithya Mudaliar, Rao Kottapalli, Sharmila Dissanaike, John Griswold, Michael San Francisco, Jane Colmer-Hamood and Abdul Hamood | How trauma affects the fate of Pseudomonas aeurginosa in blood |
4 | B |
Zhenhua Shang, Bob Friedman and Zhengqing Fu | Phylogenetic analysis of NPR1 gene within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift | 5 | A |
Alexandra Taraboletti, Tia Walker, Robin Avila, He Huang, Joel Caporoso, Erendra Manandhar, Thomas C. Leeper, David A. Modarelli, Satish Medicetty and Leah P. Shriver | Cuprizone intoxication induces cell intrinsic alterations in oligodendrocyte metabolism independent of copper chelation |
6 | B |
Noel-Marie Plonski, Bianca Bissoni, Madara Hetti Arachchilage, Karl Romstedt, Edgar E. Koojiman and Helen Piontkivska | A search for phospholipases in Kinetoplastida; a phylogenetic analysis |
7 | A |
Muhammad Rizwan Riaz and Aziz Mithani | MAPPS: Metabolic network Analysis and Pathway Prediction Server | 8 | B |
Angela Zou, John Parkinson, John Brumell, David Guttman, Doug Korver and Shayan Sharif | The Role of Selective Breeding in Chicken Genetics and Health |
9 | A |
Felix Francis, Michael D. Dumas and Randall J. Wisser | A genome-aware primer design tool and processing pipeline for SMRT tiled-amplicon resequencing | 10 | B |
Shuxiang Ruan, S. Joshua Swamidass and Gary Stormo | BEESEM: Estimation of Binding Energy Models Using HT-SELEX Data | 11 | A |
Iva Veseli, Yukun Sun and Jean-Francois Pombert | A Simple Pipeline to Assess and Visualize Genetic Diversity Between Bacterial Genomes | 12 | B |
Jason Grundstad, Robert Georgantas, Jeffrey Waring, Justin Davis and Jacob Degner | MetaGEO: an R package/R-Shiny mashup app for simultaneously exploring multiple GEO datasets. | 13 | A |
Fazle Faisal, Julie Chaney, Khalique Newaz, Jun Li, Scott Emrich, Patricia Clark and Tijana Milenkovic | Network approach integrates 3D structural and sequence data to improve protein structural comparison | 14 | B |
Mark Mammel, Jayanthi Gangiredla, Keith Lampel and Chris Elkins | Finding informative kmer DNA signatures for clustering and identification of foodborne pathogens in metagenomic datasets | 15 | A |
Marci Brandenburg, Rebecca Tagett and Richard C McEachin | Bioinformationist – the Synergistic Roles of a Librarian in the Bioinformatics Core | 16 | B |
Huaiyng Lin, Kashi Revanna, Laurynas Kalesinskas and Qunfeng Dong | GenomeExplorer: A Web-based Database System for Genomic Data Integration | 17 | A |
Danielle Oddo and Padmanabhan Mahadevan | Comprehensive bioinformatics analysis of virus associated RNAs in human adenoviruses | 18 | B |
Jacob Schreiber, Maxwell Libbrecht, Jeffrey Bilmes and William Noble | Nucleotide sequence and DNaseI sensitivity are predictive of 3D chromatin architecture |
19 | A |
Geethika Yalamanchili and Christopher V Rao | Developing computational approaches for unraveling mechanisms of genetic regulation in bacteria | 20 | B |
Manosh Kumar Biswas, Dhiman Biswas, Mita Bagchi, Zhangyan Dai, Ting Yu, Guiming Deng, Chunyu Li and Ganjun Yi | MMdb1: a web-based genomic resource for the genome-wide exploration of SSR and SNP markers for the family Musaceae |
21 | A |
Oluwatomisin Atolagbe, Sivarajan Kumarasamy, Bina Joe and Guillermo Vazquez | GENOME-WIDE RNA-SEQ ANALYSIS OF POLARIZED MACROPHAGES DERIVED FROM WILD-TYPE MICE AND FROM MICE WITH MACROPHAGE-SPECIFIC LOSS OF TRPC3 FUNCTION | 22 | B |
Michael Sparks, Joshua Rhoades, David Nelson, Daniel Kuhar, Donald Weber and Dawn Gundersen-Rindal | Transcriptomics of Harlequin Bug (Murgantia histrionica), a Major U.S. Agricultural Pest |
23 | A |
Rajib Dutta, Joseph Mainsah, Yuriy Yatskiv, Sharmistha Chakrabortty, Patrick Brennan, Basil Khuder, Larisa Fedorova, Shuhao Qiu and Alexei Fedorov | Intricacies in arrangement of SNP haplotypes suggest “Great Admixture” that created modern humans |
24 | B |
Carrie Buo | Leptin and glucose-sensing pathways: a cognitive study | 25 | A |
Alan Perez-Rathke, Monifa Fahie, Min Chen and Jie Liang | Computational modeling of OmpG pH-dependent gating | 26 | B |
Marc Griesemer and Ali Navid | HDMOFA: A Tool for High Dimensional Multi-Objective Flux Analysis in Genome-Scale Models of Metabolism | 27 | A |
Emily Trenka | Photoelastic Force Management | 28 | B |
Houxiang Zhu, Richmond Emily and Chun Liang | CRISPR-RT: A web service for designing CRISPR-C2c2 crRNA with improved target specificity | 29 | A |
Vitor A C Pavinato, Saranga Wijeratne, Andrew P Michel and Tea Meulia | Read merging and clustering minimizes sequencing errors in amplicon sequencing from target-enrichment PCR protocol | 30 | B |
Xiao Hu and Iddo Friedberg | A pipeline for discovery and analysis of operons in metagenomes |
31 | A |
Huy Nguyen, Oliver Eulenstein and Iddo Friedberg | Reconstructing ancestral states of operons |
32 | B |
Peng Deng | Epigenetic Mechanisms of Memory Formation | 33 | A |
Alysha Cypher, Alex Taraboletti, Leah Shriver and Brian Bagatto | Characterization of tissue-specific lipid profile in Danio rerio using shotgun lipidomics | 34 | B |
Mark Maienschein-Cline, George Chlipala, Zhengdeng Lei, Hong Hu, Pinal Kanabar and Stefan Green | Uniformity of reference coverage and taxonomic abundance estimates in shotgun metagenomics data sets |
35 | A |
Charul Agrawal, Pallavi Grover, Mahesh Dadhich, Samuel Burns, Joydeep Sarkar and Gaurav Dwivedi | Method for region-specific population health prediction using virtual populations based on a simulation model of individual health | 36 | B |
Aram Karkar, Osamah Hamzeh, Abed Alkhateeb and Luis Rueda | Finding Biomarkers Associated with Prostate Cancer Gleason Stages using Next Generation Sequencing and Machine Learning Techniques | 37 | A |
Sung Joon Park, Won Seok Song, Suhoon Oh and Kyung Dae Ko | The change in gut microbiomes between obesity and non-obesity groups among different populations | 38 | B |
Manish Datt and Helly Shah | Molecular Descriptor Based Evaluation of Drug-Likeliness and Chemical Space of Natural Products | 39 | A |
Olaitan Awe, Angela Makolo and Segun Fatumo | Insilico Identification of Protein-Coding and Non-Coding Regions in Next-Generation Technology Transcriptome Sequence Data: A Machine Learning Approach | 40 | B |
Ahmed Metwally, Yang Dai, David Perkins and Patricia Finn | Microbiome Dynamics as Predictors of Lung Transplant Rejection | 41 | A |
Andrea Garretto and Catherine Putonti | Identifying Viral Genomes within Complex Communities | 42 | B |
Jonathan Chen, Lyndsey Schmucker and Donald Visco | Developing a virtual high-throughput screening pipeline for faster drug discovery: Factor Xia and XIIa lead identification and confirmation | 43 | A |
Madan Baral, Ricardo Avila, Jonathon E Mohl, Ming-Ying Leung and Rachid Skouta | In silico evaluation of human OX2 orexin receptor (hOX2R) inhibitors using AutoDock and Glide | 44 | B |
George Chlipala, Ankur Naqib, Weihua Wang, Kyle J. Popovich, Mark Maienschein-Cline and Stefan Green | Integrating sub-OTU Processing and Improving Taxonomic Annotation in a Standard QIIME Workflow | 45 | A |
Pasan Fernando, Laura Jackson, Erliang Zeng and Paula Mabee | A generic bioinformatics pipeline to integrate large-scale trait data with large phylogenies | 46 | B |
Ankit Bhaukajee, Shreya Paithankar and Guenter Tusch | Searching Online Repositories For Useful Time Patterns | 47 | A |
Reda Rawi, Jeffrey C. Boyington, Katie Farney, M. Gordon Joyce, Thomas Lemmin, Chen-Hsiang Shen, Kai Xu, Peter D. Kwong and Gwo-Yu Chuang | A computational approach to identify antigenic sites on viral proteins vulnerable to neutralizing antibody and suitable for immunogen design |
48 | B |
Ahmet Süreyya Rifaioğlu, Tunca Dogan, Ömer Sinan Saraç, Rabie Saidi, Volkan Atalay, Maria Martin and Rengul Cetin-Atalay | UniGOPred: A Large Scale Automated GO Term Annotation System for UniProtKB |
49 | A |
Isabelle Birt, Megan Hagenauer, Sarah Clinton, Cigdem Aydin, Peter Blandino, Fan Meng, John Stead, Robert Thompson, Stanley Watson and Huda Akil | Exploring Differences in Gene Expression and Relative Cell Type Balance in the Hippocampus of a Selectively Bred Rat Model for Internalizing and Externalizing Psychiatric Disorders | 50 | B |
Archana Yadav, Gitanjali Yadav and Jitendra Thakur | KIXBASE: A KIX domain database and web server for prediction and analysis | 51 | A |
Sumaiya A. Islam, Sarah J. Goodman, Julia L. MacIsaac, Ronald G. Barr, W. Thomas Boyce and Michael S. Kobor | Integration of DNA methylation patterns and genetic variation in pediatric blood and buccal tissues |
52 | B |
David Fehr, Manu Manu and Yen Lee Loh | Inferring Gene Regulatory Networks from Time Series Data Using Glass Models | 53 | A |
Edgar Roldan, Ana Lisica, Daniel Sánchez-Taltavull and Stephan Grill | Stochastic resetting in backtrack recovery by RNA polymerases |
54 | B |
Mary Saha, Chanelle Waligura, Madara Hetti Arachchilage and Helen Piontkivska | Mutation patterns in EBOV: Potential Long Term Impacts |
55 | A |
Olugbenga Taiwo, Solomon Oranusi, Marion Adebiyi, Nandita De, Yemisi Obafemi, Oluwatoyin Afolabi, Joshua Owolabi, Olagbenro Popoola, Samuel Ejoh, Ige Ojo, Busayo Olawoyin, Olufisayo Awotoye and Oloyede | MICROBIOLOGICAL ASSESSMENT OF COMMERCIAL YOGURT SOLD IN OTA METROPOLIS, OGUN STATE, NIGERIA |
56 | B |
Shagun Sharma, Mathew Lee and John Senko | Tracking the distributions microbial communities and activities associated with acidic coal-mine drainage in Appalachia, USA | 57 | A |
Jingting Xu and Yang Dai | Inferring genome-wide absolute methylation level from DNA enrichment experiment |
58 | B |
Travis Pero Leptin | A Knock-out Mutation Alters Fat Metabolism Pathways in Zebrafish | 59 | A |
Chris Walsh | Leptin A Knockout Studied With RNASeq | 60 | B |
Kai Wang and Chun Liang | piRNN: Deep Neural Network for piRNA prediction | 61 | A |
Shawn Gu and Tijana Milenkovic | From Homogeneous to Heterogeneous Network Alignment | 62 | B |
Taylor Miller-Ensminger, Catherine Putonti and Jason Shapiro | An Investigation Into the Evolution and Ecology of Lactococcus and Gardnerella Phages | 63 | A |
Joseph Haddad, Timothy W. O'Neil and Haitao Zhao | Accelerated Sparse Conditional Gaussian Graphical Models | 64 | B |
Caleb Kupetz, Joe Haddad and Anthony Deeter | Genomic Dataset Extraction Application | 65 | A |
Duc Do and Serdar Bozdag | A novel method to infer cancer-specific competing endogenous RNA networks | 66 | B |
Alperen Dalkiran, Ahmet Süreyya Rifaioğlu, Tunca Dogan, Volkan Atalay, Maria Martin and Rengul Cetin-Atalay | ECPred: An Automated Enzymatic Function Prediction Tool Based on Combination of Different Classifiers | 67 | A |
Aditya Rao, Saipradeep Vg, Thomas Joseph, Sujatha Kotte, Naveen Sivadasan and Rajgopal Srinivasan | Text-Mining Of MEDLINE For Rare Disease Studies |
68 | B |
Daniel Wickland, Karen Hudson and Matthew Hudson | A genotyping-by-sequencing bioinformatics pipeline optimized for accurate, simplified data processing | 69 | A |
Amrita Roy Choudhury and Yanli Wang | Analyzing the single nucleotide variations (SNVs) associated with protein-drug binding sites and neighboring residues | 70 | B |
Nick Predey, Jason Shapiro and Catherine Putonti | Representing Complex Viral Communities as Networks | 71 | A |
Kymberleigh Pagel, Vikas Pejaver, Guan Ning Lin, Hyunjun Nam, Matthew Mort, David Cooper, Jonathan Sebat, Lilia Iakoucheva, Sean Mooney and Predrag Radivojac | Functional signatures and impact of loss-of-function genetic variants |
72 | B |
Jayanthi Gangiredla, Carmen Tartera, Mark Mammel, Tammy Barnaba, Britt Freeman, Keith Lampel and Chris Elkins | Systems biology study of gut microbiota composition and functional profiling using a novel kmer database to monitor changes in diet |
73 | A |
Seyedsasan Hashemikhabir and Sarath Janga | Uncovering the RNA editing landscape in Glioblastoma to identify a compendium of prognostic editing alterations to classify cancer subtypes | 74 | B |
Shang Gao, Trevor Leonardo, Xiaofeng Zhou and Yang Dai | An integrative analysis of microRNA and mRNA expression data of head and neck cancer | 75 | A |
Yusuf Barudi | Genomic Data Pooling to Identify Differentially Expressed Genes in Polycystic Ovary Syndrome (PCOS) | 76 | B |
Megan Hagenauer, Jun Li, David Walsh, Marquis Vawter, Robert Thompson, Cortney Turner, William Bunney, Richard Myers, Jack Barchas, Alan Schatzberg, Stanley Watson and Huda Akil | Inference of cell type composition from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis |
77 | A |
Danny Baghdan, Lauren Mogil, Carlos Perez-Cervantes and Heather Wheeler | Transcriptome-based Association Study Comparing Susceptibility to Multiple Cancer Types | 78 | B |
Geysa Fernandes, Cauanne Linhares, Angela Andaleon, A. Laryssa Seabra, Sarah Wohler, Darwin Gutierrez, Catherine Putonti and Mark V. Albert | Efficient probabilistic nucleotide sequence matching and aggregate analysis using k-mer feature vectors |
79 | A |
Subhanwita Ghosh, Bruce S. Levison, Sadik Khuder, Fatimah K. Khalaf, Andrew L. Kleinhenz, Erin L. Crawford, Deepak Malhotra and David J. Kennedy | Regulatory Mechanisms of Cardiotonic Steroids in Chronic Kidney Disease |
80 | B |
Alexa Badalamenti, Virginia Saulnier, Natalie Jachym, Amani Almatrafi, Jeffrey Ng, Shyam Shah and Heather Wheeler | Gene expression predictive performance varies across populations |
81 | A |
Lorena Pantano Rubino, Francisco Pantano Rubino, Eulalia Marti and Shannan Ho Sui | Visualization of the small RNA transcriptome using seqclusterViz |
82 | B |
Kimberly Mackay, Christopher Eskiw and Anthony Kusalik | Graph-Based Visualization of Whole-Genome Contact Maps | 83 | A |
Sean Rodaitis | Parallel Coordinate Gene Expression Analysis of Lung adenocarcinoma (LUAD) and Lung squamous cell carcinoma (LUSC) | 84 | B |
Brittany Baur and Serdar Bozdag |
CARMMA: A computational pipeline to detect cancer-related miRNA-gene modules and associated disrupted biological processes | 85 | A |
Yuxiang Jiang, Shawn Peng and Predrag Radivojac | How many consistent subgraphs are there in biomedical ontologies as directed acyclic graphs? | 86 | B |
Genki Terashi and Daisuke Kihara | MAINMAST: Building main-chain models for medium resolution electron microscopy maps | 87 | A |
Zhengdeng Lei, Hong Hu, George Chlipala, Pinal Kanabar, Morris Chukhman and Mark Maienschein-Cline | Genomic signatures to guide gastric cancer chemotherapy |
88 | B |
Lyman Monoe, Genki Terashi and Daisuke Kihara | How reliable are protein structures determined by electron microscopy? | 89 | A |
Arunachalam Ramaiah, Amanda J. Williams-Newkirk, Michael A. Frace, Maria L. Zambrano and Gregory A. Dasch | Genome Evolution of Coxiella-Like Endosymbionts in the Ticks, Rhipicephalus sanguineus and Amblyomma americanum | 90 | B |
Jyothi Thota, Marek A. Tutaj, Jennifer R. Smith, Jeffrey J. De Pons, Stanley L. Laulederkind, G. Thomas Hayman, Victoria Petri, Shur-Jen Wang and Mary E. Shimoyama | Interviewer, a Cytoscape-based tool to visualize protein-protein interaction network | 91 | A |
Paul J. Risteca and John J. Kelly |
Spatial variability in the composition of bacterial biofilms in drinking water pipes | 92 | B |
Ye Zheng, Ferhat Ay and Sunduz Keles | Statistical Methods for Profiling 3-Dimentional Chromatin Interactions from Repetitive Regions of the Genome | 93 | A |
Woong-Hee Shin and Daisuke Kihara | PL-PatchSurfer2: a virtual screening method tolerant to receptor structure variation using surface-patch matching | 94 | B |
Deborah Chasman, Alireza Fotuhi Siahpirani, Maria Estevez Silva, Randolph S Ashton and Sushmita Roy | Characterizing expression state dynamics and regulatory networks in early neural development | 95 | A |
Anthony Deeter, Mark Dalman and Zhong-Hui Duan | A comparison between lung adenocarcinoma and lung squamous cell carcinoma using genetic interaction inferences | 96 | B |
Madara Hetti-Arachchilage and Helen Piontkivska | Molecular coevolutionary analysis of HIV-1 protein-protein interaction interfaces | 97 | A |
Amira Kefi, Lingling Huang and Chunyu Liu | Identification of novel transcripts in brain tissue using third generation sequencing: ISO-seq | 98 | B |
Anna Terebus, Chun Liu and Jie Liang | Accurate Computation of Probability Velocity and Flux Fields in Stochastic Networks | 99 | A |
Lila Rieber and Shaun Mahony |
3-D Human Genome Structures at Kilobase Resolution | 100 | B |
Hasitha Premathilake, Katie Grausam, Haotian Zhao and Erliang Zeng | Atonal homolog 1 promotes metastasis of Sonic Hedgehog subgroup medulloblastoma: An integrative analysis of multi-omics data | 101 | A |
Aashish Jain and Daisuke Kihara | Phylo-PFP: Highly accurate phylogenomics based protein function prediction method | 102 | B |
Daniel Mogollon and Jonathon Mohl | A computational pipeline for predicting G protein-coupled receptors (GPCRs) | 103 | A |
Matthew Tuttle | Genetic Cataloguing of the 2014 Sierra Leone Ebolavirus RNA Genome | 104 | B |
Ali Navid, Yongqin Jiao, Benjamin Stewart and Wayne Harris | System-Level Multi-Objective Flux Analysis of Metabolism in Chlostridium phytoferementans For Optimal Production of Biofuels | 105 | A |
Olivia Hershey and Hazel Barton | Validation of low-biomass aquifer sampling technique by 16S rRNA community analysis | 106 | B |
Thevaa Chandereng and Anthony Gitter | Time Series Clustering with Lag Penalized Weighted Correlation | 107 | A |
Adithya Murali, Aniruddha Bhargava and Erik Wright | Substantially Improving Accuracy of Sequence Classification for Microbiome Surveys | 108 | B |
Jasen Jackson and Howard Laten | Investigating the Role of LTR Retrotransposon Insertions in the Domestication of Soybean | 109 | A |
Evan Cudone, Laurynas Kalesinskas and Qunfeng Dong | GxA: A Tool for Creating and Analyzing Gene Co-Expression Networks | 110 | B |
Rahul Shaju and Howard Laten | Determining the Mechanism of Evolution in Trifolium repens by Analyzing Retrotransposon Activity | 111 | A |
Jinyu Yang and Qin Ma | Regulatory DNA motif identification by integrating DNA shape in a deep learning framework | 112 | B |
Kayla Calapa, Olivia Hershey and Hazel Barton | Taking a look at the ultra-small side of life: microbial diversity of Wind Cave | 113 | A |
Miyuraj Harishchandra Hikkaduwa Withanage, Laura Joy White, Senthil Subramanian and Erliang Zeng | Functional and network analysis of soybean rhizosphere bacterial communities influenced by isoflavonoids using metagenomics data |
115 | A |
Michael Sierk, Hayley Orndorf, William Morgan and Sam Donovan | NIBLSE Incubators: A community based model for improving access to bioinformatics learning resources | 116 | B |
Vatsal Mehra, Valerie Trapp-Stamborski, Mary Shimoyama, Lars Olson and Serdar Bozdag | SNPredict: A novel pipeline for detecting low frequency variants in unmatched normal and tumor datasets | 117 | A |
Laurynas Kalesinskas, Nicholas Predey, Maxwell Kelly, Evan Cudone and Catherine Putonti | KScope: A Fast Machine Learning Composition-Based Functional Classification Tool |
118 | B |
Carla Mann and Drena Dobbs | Predicted Protein Intrinsic Disorder Improves in silico Identification of RNA-Protein Interaction Partners | 119 | A |
Taejeong Bae, Flora Vaccarino and Alexej Abyzov | Comprehensive profiling of somatic mosaicism in the human brain | 120 | B |
Morris Chukhman, Jian-Lei Gu, Cong Liu, Mark Maienschein-Cline, Hong Hu, George Chlipala, Pinal Kanabar, Zhengdeng Lei, Hui Lu and Neil Bahroos | scRNA-seq Support for Internal Fusion Clone Ratio as Heterogeneity Metric in Glioblastoma Multiform |
121 | A |
Hong Hu, Zhengdeng Lei, George Chlipala, Morris Chukhman, Pinal Kanabar and Mark Maienschein-Cline | Infer functional Transcription Factor Binding from Gene Expression Time Course data using Lasso regression | 122 | B |
Rachael Wasikowski, Jennifer K. Holmes, Andrea Doseff, Erich Grotewold and John Gray | Phylogenomic Analysis of the PLATZ family of Transcriptional Regulators in Plants |
123 | A |
Subin Park, Fernanda Nascimento, Jessica Hofstetter, Michael Arrowood, Yvonne Qvarnstrom and Eldin Talundzic | Identifying Potential Genetic Markers for the Molecular Surveillance of Cyclosporiasis Outbreaks | 124 | B |
Salman Akthar, Rishikesh Savaliya and Sushma Reddy | Using morphometrics to study shape variation of an adaptive radiation | 125 | A |
Haris Ahmad, Osama Hamzeh, Abed Alkhateeb and Luis Rueda | An Open Source Machine Learning Tool for Identifying Biomarkers in Next Generation Sequencing | 126 | B |
Sajad Mirzaei and Yufeng Wu | RENT+: An Improved Method for Inferring Local Genealogical Trees from Haplotypes with Recombination | 127 | A |
Ceth Parker, Augusto Auler, Michael Barton, Ira Sasowsky, John Senko and Hazel Barton | The Role of Fermentative Iron-Reducing Bacteria in Iron Ore Cave Formation | 130 | B |
Daniel Magee and Matthew Scotch | A pipeline for production of BEAST XML files with generalized linear model specifications | 131 | A |
Xinan Yang, Fangming Tang, Jisu Shin and John Cunningham | A systematic discovery of Roniciclib targeting cMyc-regulated stem cell-like signature in high-risk neuroblastoma | 132 | B |
Laura Krance and Thomas Sanger | Expression of Heat Shock Protein Genes in Anolis sagrei embryos under thermal stress | 133 | A |
Jose Lugo-Martinez and Predrag Radivojac | New framework for classification in biological networks | 134 | B |
Yichao Li and Lonnie Welch | Reverse engineering of the human genome: predicting protein-DNA interactions across multiple cell types | 135 | A |
Stuart Matan-Lithwick, Noriyuki Kijima, Laura Donovan, Sorana Morrissy, Livia Garzia, Florence M.G. Cavalli, Gary Bader and Michael Taylor | Setting the Stage for Metastasis: Specific Profiles of Pathway Activity in Medulloblastoma Primary Tumours Correlate with Metastasis | 136 | B |
Zhixiu Lu, Sagar Patel, Anne Fennell and Erliang Zeng | Merging two grape genome assemblies iteratively improves the quality | 137 | A |
Erica Depasquale, Jennifer McGuire and Robert McCullumsmith | Serine-threonine kinome array analysis in traumatic brain injury | 138 | B |
Jing Hu and Bryan Andrews | Distinguishing long non-coding RNAs from mRNAs using a two-stage classifier | 139 | A |
Aseel Awdeh and Theodore Perkins | Analysis of ChIP-seq Controls | 140 | B |
Gabriel Al-Ghalith and Dan Knights | EMBALMER guarantees optimal short-read alignment at speed of heuristic aligners | 141 | A |
Cheng Yong Tham and Touati Benoukraf | Characterizing Structural Variants in Acute Myeloid Leukemia using Long and Short Read Sequencing | 142 | B |
Touati Benoukraf, Xiaoxuan Lin, Khadija Rebbani and Sudhakar Jha | Evidences for the Role of ZBTB33 (Kaiso) in Heterochromatin Priming | 143 | A |
Taylor Brooks, Remi Jones, Antoinesha Hollman and Raphael Isokpehi | Stress Response Equipped Actinomyces Operon for Sugar Transport and Metabolism | 144 | B |
Maryam Rabiee, Erfan Sayyari and Siavash Mirarab | Multi-allele species reconstruction using ASTRAL | 145 | A |
Amir Bayegan and Peter Clote | MS2 Distance Between Two RNA Secondary Structures | 146 | B |
Brenda Xiao, Theodore Roman and Russell Schwartz | Using Heterogeneous Tumor Features to Predict Vital Status in Breast Cancer Patients | 147 | A |
Ji Woong Park, Jay Jiang, Chris Chow and Tim Peterson | Systematic approaches to identify novel orphan genes in bone homeostasis | 148 | B |
Filipe Liu, Isabel Rocha and Miguel Rocha | Metabolic integration using graph databases | 149 | A |
Junyu Li, Matthew Kendzior, Liudmila Mainzer and Matthew Hudson | Reference-guided Variant Calling for Non-Reference Non-Repetitive Sequence in Glycine max | 150 | B |
Kalpana Raja, Matthew Patrick and Lam C Tsoi | Using disease co-occurrence to promote new gene prediction for complex diseases | 151 | A |
Naureen Aslam Khattak, Hongtao Li and Yongsheng Bai | The Prediction and Visualization of miRNA and mRNA Pair Associated in Breast Cancer | 152 | B |
M. Joseph Tomlinson Iv and Behnam Abasht | Comparison of Allele Specific Expression in Various Tissues of Chickens | 153 | A |
Clayton Collings | Links between DNA methylation and nucleosome occupancy in the human genome | 154 | B |
John Cole | A Careful Accounting of Extrinsic Noise in Protein Expression Reveals Correlations Among its Sources | 155 | A |