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Scroll down for a full listing of posters. |
General Information:
- Posters will be available for viewing on Saturday, December 6. There is one scheduled poster session this year, Saturday, December 6 from 5:30pm to 7:30pm. Poster Presenters should be available for presentation during the scheduled poster session.
- There will be no pre-assigned poster boards, please place your poster on any available boards in the Room.
- The poster board dimensions are 4' high x 6' wide. Tacks will be provided
for securing your poster to the board.
Schedule:
Saturday: December 6, 2008 |
8:00 am - 1:00 pm Presenter/author set up posters |
Saturday: December 6, 2008 | 5:30 pm - 7:30 pm Poster Session/Reception with presenter/author Location: Eldorado A&B Room, Silvertree Hotel |
Sunday: December 7, 2008 | 11:30 am - 1:00 pm Presenter/author remove posters |
FURTHER QUESTIONS
Rocky Conference Coordinator
Stephanie Hagstrom
rocky@iscb.org
360-239-9177

Poster Presenters and Abstracts (updated 11/13/08)
PDF listing of the Poster Presenters and Abstracts - Click here.
Listed in alphabetical order by presenter's last name:
Sajia Akhter, San Diego State University
Shannon's Uncertainty and Kullback-Leibler Divergence in Microbial Genome and Metagenome Sequences
Edward E. Allen, Wake Forest University
A Comparison of Next-state (dynamic) and Co-temporal (static) Modeling of Time Course Data: Multiple Approaches Provide Complementary Information
Ramy Aziz, Cairo University
Computer-based Determination of ETEC Pathotype-specific Genes to Discover Targets for Molecular Diagnosis and Reverse Vaccinology
Peter H. Baenziger, Indiana University School of Medicine
Extended Analysis and Prediction of Gain and Loss of Phosphorylation Sites in Cancer
Angshuman Bagchi, Indiana University School of Medicine
Analyses of Features for Prediction of Protein-protein Interactions in Protein Hetero-complexes and Their Impact on Human Disease
Shweta Bhandare, University of Colorado Boulder
Discovery of HuR Binding Sites Using a Machine Learning Approach
Ljubomir Buturovic, Pathwork Diagnostics, Inc.
An Empirical Evaluation of Relevance Vector Machine for Gene-expression-based Cancer Diagnostics
J. Gregory Caporaso, University of Colorado Denver
Sequence Cooccurrence and Covariation Suggest Specific Physical Interactions Between Type VI Secretion System Components
Shweta S. Chavan, UALR / UAMS Joint Bioinformatics program
Natbox: A Network Analysis Toolbox in R
Argon Chen, National Taiwan University
Statistical Data Mining and Its Applications to Microarray Analysis
Judith Cohn, Los Alamos National Laboratory
BIOGRAM: Algorithms for Identifying "Similar" Proteins by Functional Annotation
Jessica Dantzer, Indiana University School of Medicine Center
Molecular Characterization of Insertional Mutagenesis Sites in Gene Therapy Studies
Elizabeth Eskow, University of Colorado Boulder
Co-evolutionary Analysis of Mediator: a Multi-subunit Protein Complex
Uday S. Evani, Indiana University
Using Protein Functional Features to Predict Deleterious Mutations Using Saturation Mutagenesis Data
Suzanne Gallagher, University of Colorado
Graph Theoretic Properties of Known Complexes
David Gnabasik, University of Colorado Boulder
Optimizing Proteomic Biomarker Discovery – Incorporating Prior Experimental Data
Chirayu Goswami, Indiana University
PHYLOCLUST – A Web Based Service for Clustering Human Genes Using Evolutionary Distances as Clustering Features
Jamison R. Hemmert, Indiana University
Laboratree: Extensible Basic Research Application and Data Management Using the OpenSocial Platform
Stacy Hung, Hospital for Sick Children
Reconstructing the Metabolic Network: a Probabilistic Approach to Improve Enzyme Prediction
Shubham Jain, Jaypee Institute of Infomation Technology
An Efficient Approach to Protein Folding Trajectory Analysis
Kishore Kamati, Indiana University
MutDB: Enhanced Biochemical Analysis of Structural and Functional Features of Genetic Variations
Hyunmin Kim, University of Colorado
A Motif-based Phylogenetic Mixture Model for Discriminating Transcription Factor Binding Sites
Michael Knudsen, Bioinformatics Research Center
An Algebraic Topology Approach to the Classification of Protein Domain Structures
Vidhya Krishnan, Indiana University
A Functional Analysis of Novel Non-synonymous SNPs in the Thailand SNPs Discovery Project
Robert Leaman, Arizona State University
Beyond Dictionary Match for Disease Named Entity Recognition
Chang Liu, The University of Hong Kong
CADEG, a Set of Software Tools for High Resolution Identification of Potential Chromosomal Abnormalities
Sean Mooney, Indiana University
Predicting Molecular Functions Disrupted by Mutations Using In Silico Functional Profiling
Matthew Mort, Cardiff University
The Human Gene Mutation Database (HGMD) and its Biomedical Exploitation
Joy A. Nellis, Indiana University
Enabling Basic Biomedical Core Services Using Informatics: Experiences Developing a Fee-for-service Bioinformatics Core
Eric Neumann, Science Commons, MIT
A Semantic Architecture for Biologics Research at Merck
Mary J. O'Connell, Dublin City University
The Phylogeny of the MHPs and Beyond
Brandon Peters, IU School of Medicine
COBRA: A Web-based Tool for Genotype/phenotype Data Management.
Pere Puigbo, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health
Insights on the "Oaks" of the Forest of Life
Peter Salamon, San Diego State University
Category Theory and the Notion of Natural in Bioinformatic Models
Craig Sanders, Indiana University
A HUB for Indiana's Clinical and Translational Sciences Institute
Trevor Sarratt, University of Tulsa
Towards a Multi-Level Calculus for Cellular Modeling and Simulation
Peter Serguta, Indiana University
OSIRiS: An Open Source PHP-Based Laboratory Management System
Elena K. Shematorova, Russian Academy of Sciences
Expression Profiles of Human PMS2-Related Genes: Bioinformatics and Experimental Studies
Heesun Shin, Simon Fraser University
Application of Next-generation Sequencing Technology for Comparative Transcriptome Analysis in the Nematodes C. Elegans and C. Briggsae
George V. Shpakovski, Russian Academy of Sciences
Hominoids-specific Molecular Evolution of PMS2 Gene Family and its Possible Biological Implications
Shaneka Simmons, Jackson State University
Abundance Of Universal Stress Protein Family In Finished Prokaryotic Genomes
Hongyan Song, Hospital for Sick Children
Modelling Elastin Self-Assembly
Jason A. Stowe, Cycle Computing
Analysis of Workflows on Inexpensive, Massive Comptuational Grids in the Cloud
Cory Strope, University of Nebraska
Biological Sequence Simulation For Complex Evolutionary Hypotheses
Pooja Strope, University of Nebraska
Identification of Candidate Nuclear Receptors and Sterol Sensing Domain Proteins in the Eukaryotic Species using Multi-domain Information
Michael P. Verdicchio, Arizona State University
Learning Causal Relationships between Genes from Steady State Data: Algorithms, Simulation and Application
Joshua Waymire, Indiana University
Using the OpenSocial Platform to Develop Open, Exchangeable Web Based Biomedical Research Applications
Dana Willner-Hall, San Diego State University
Metagenomic Signatures of 86 microbial and Viral Metagenomes
Brant Wong, Affymetrix, Inc.
Copy Number Probe Selection Using a MIP Assay
Abdullah al Zahrani, Fish Farming Centre
Gene Silencing Score
Faiz ul haque Zeya, Bahria University
Decision Tree and Neural Network Based Cancer Diagnosis Tool Canny Cancer Detector
Yiqiang Zhao, Indiana University
Improving the Prediction of Regulatory SNPs Using Functional Information
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