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The ISCB Affiliates program is designed to forge links between ISCB and regional non-profit membership groups, centers, institutes and networks that involve researchers from various institutions and/or organizations within a defined geographic region involved in the advancement of bioinformatics. Such groups have regular meetings either in person or online, and an organizing body in the form of a board of directors or steering committee. If you are interested in affiliating your regional membership group, center, institute or network with ISCB, please review these guidelines (.pdf) and send your exploratory questions to Diane E. Kovats, ISCB Chief Executive Officer (This email address is being protected from spambots. You need JavaScript enabled to view it.). For information about the Affilliates Committee click here.
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Programme Schedule tentative and subject to change.
Programming time is Central Mexican Time.
Wednesday – Day 1 – October 28, 2020 |
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Go directly to: Thursday, Oct 29 | ||
START TIME |
END TIME |
SESSION TYPE |
10:00 am | 10:05 am | Welcome, Overview of Meeting Schedule |
10:05 am | 10:35 am | Keynote: Updating the conceptual framework of the regulation of transcription initiation in bacteria (RegulonDB) Julio Collado Vides |
10:35 am | 10:50 am | Computational Evolutionary Biology of Microorganisms Moderator: Ernesto Pérez Rueda Bacterial community composition of the Rimac river, the main water source for Lima, Peru Pedro Romero Agave lechuguilla and soil properties as sculptors of the rhizospheric bacterial community Guadalupe Medina Pangenome analysis of the genus Clavibacter suggests the origin of bacterial canker pathogenicity Nelly Sélem-Mojica |
10:50 am | 11:45 am | Stretch Break |
11:45 am | 12:15 pm | Keynote: Evolution of structural and functional features in intrinsically disordered proteins Lucia Chemes |
12:15 pm | 1:00 pm | Strategies in Cancer Genomics: From family to population studies Moderator: Carla Daniela Robles-Espinoza GLIOBLASTOMA MULTIFORME: A META-ANALYSIS OF DRIVER GENES, CURRENT DIAGNOSIS, AND TUMOR HETEROGENEITY Katia Aviña-Padilla Highly-connected, non-redundant microRNAs functional control in breast cancer molecular subtypes Guillermo de Anda-Jáuregui |
1:00 pm | 2:00 pm | Lunch Break (open networking, system will be open with opportunity to ask for a breakout room) |
2:00 pm | 2:30 pm | Keynote: Exploring associations between cancer genes and pharmacological compounds: target-drug networks and GEDA Monica Arroyo |
2:30 pm | 3:00 pm | Presentation Roundtable |
3:00 pm | 4:00 pm | Women in STEM Panel Moderator: Selene Fernandez-Valverde Sandrine Dudoit Rafaela Salgado Ferreira Alejandra Eugenia Medina Rivera Morgane Thomas-Chollier |
Thursday – Day 2 – October 29, 2020 | ||
Go directly to: Wednesday, Oct 28 | ||
START TIME |
END TIME |
SESSION TYPE |
10:00 am | 10:05 am | Day 1 Review and Welcome to Day 2 |
10:05 am | 10:35 am | Keynote: Bioinformatics modern challanges: from genes to ecosystems Alicia Mastretta |
10:35 am | 11:30 am | Population dynamics and Evolution in Eukaryotes Moderator: Federico Sanchez Ancestry Packages: Merging uniparental and autosomal genetic histories Vladimir Bajić Integrated synteny- and similarity-based inference on the polyploidization-fractionation cycle David Sankoff Reading the book of life: the language of proteins Malay Basu Review of HLA frequencies by country allowed immunoinformatic prediction of SARS-CoV-2 candidate epitopes specific for South America Aldhair Medico Vesicular glutamate transporter (VGLUT) genes: origin, evolution and molecular signatures underpinning glutamate transport in animals Nicolas Zuniga |
11:30 am | 11:45 am | Stretch Break |
11:45 am | 12:15 pm | Keynote: Uncovering the Colombian microbial diversity through metagenomics Alejandro Reyes |
12:15 pm | 1:05 pm | Bioinformatic strategies and methods to unravel RNA Genomics Moderator: Alejandro Reyes Quiroz Logical modeling of dendritic cells in vitro differentiation from human monocytes unravels novel transcriptional regulatory interactions Karen Nuñez-Reza Comparative and systems analyses of Leishmania spp. non-coding RNAs through developmental stages J. Eduardo Martinez Automatic GO annotation of Long Non-coding RNAs Flavio Spetale Ribolog: a toolkit for unbiased analysis of ribosome profiling data Hosseinali Asgharian Automated generation of context-specific Gene Regulatory Networks with a weighted approach in D. melanogaster Alberto Jesus Martin Reverse regression increases power for detecting trans-eQTLs Franco Simonetti |
1:05 pm | 2:05 pm | Lunch Break (open networking, system will be open with opportunity to ask for a breakout room) |
2:05 pm | 2:30 pm | Keynote: Genomics in Cancer Claudia Carranza |
2:30 pm | 2:45 pm | Stretch Break |
2:45 pm | 3:55 pm | Methods and Algorithms in Computational Molecular Biology Moderator: Benilton Carvalho Virtual screening of potential kinase inhibitors within the PI3K/AKT pathway of Leishmania Rodrigo Ochoa Alignments of Biomolecular Contact Maps Peter F. Stadler Design and evaluation of an intelligent bioinformatics platform through a Geospatial Information and Machine Learning System using data from the qPCR molecular Diagnostic Tests of the SARS-CoV-2 virus in Costa Rica and Central America Allan Orozco A mathematical model of the metabolism and accumulation of PZA in Mycobacterium tuberculosis Rydberg Supo-Escalante MOLECULAR DOCKING OF SARS-COV-2 RNA POLYMERASE REVEALS POTENT INHIBITORS OF REPLICATION MACHINERY THAN THE CURRENT REPOSITIONED DRUGS Cleidy Mirela Osorio Mogollón Predicted CoronaViruses Self-Interactome Completeness Correlates Inversely with their Transmissibility Gabriel Del Rio Identification of co-binder partners of different transcription factors using non-negative matrix factorization Jaime Castro-Mondragon GSER: A pipeline for genome size estimation and quality assessment of sequenced genome libraries Gonzalo Riadi |
3:55 pm | 4:00 pm |
Closing Remarks and Thank You |
The Interface Focus Journal has committed to creating a special issue for this conference with up to twelve peer-reviewed articles.
In addition to the standard submission information, authors are expected to submit a PDF of the written article following the preparation guidelines as outlined by Interface Focus Journal. Article preparation guidelines can be found here.
Article submissions will close August 1st, initial review will be done and authors will have an opportunity to update and prepare their final manuscripts. The final date for updates will be August 30th. The review period by the Royal Society will be from August 1st to September 30th . We will give authors two months to reply to comments in order to have the list of accepted articles at the end of September. Outstanding articles will be selected for featuring talks (10 total minutes in length with 2 minutes reserved for Q&A).
Authors are responsible for fees related to publishing as deemed by Royal Society.
ISCB-Latin America SoIBio BioNetMX Symposium on Bioinformatics 2020 invites abstracts topical to bioinformatics and computational biology for consideration for flash talk and/or poster presentation.
Flash talks and posters will be organized according to scientific topics, which are covered by the symposium (see below). Please note, abstracts are not limited to the listed conference topics and if the topic of your submission falls outside the listed ones you can choose the "General Computational Biology" area. Your abstract should convey a scientific result and should not be an advertisement for any commercial software package.
Abstracts will be selected for flash talk or poster presentation on the corresponding session. General Computation Biology abstracts will be accommodated in the closest area for the topic per recommendation of the reviewers.
Conference areas:
Abstracts selected for flash talk will be presenting using the 3 minute thesis or Ignite talks presentation style or a single slide or PDF. All talks will be recorded and available to participants as well as included in a broadcast schedule as part of the symposium schedule. Organization of the schedule will be based on topic. All schedules will be posted on the ISCB-LA SoIBio BioNetMX 2020 website. A best flash talk prize will be awarded which will be voted on by participants to select a winner. A social will be held at the end for participants to mingle virtually.
Abstracts selected for poster presentation will be part of the virtual poster hall associated with the symposium. Each presenter will be asked to record a 3 minute poster presentation. Poster will be open for viewing throughout the duration of the symposium with a Q&A function.
Authors selected for presentation (flash talk or poster) will be required to register for the symposium.
We invite scientists and professionals working in the fields of bioinformatics and computational biology to submit high-quality proposals for tutorials, workshops or mini-courses (tutorial program) to take place virtually as part of ISCB-Latin America SoIBio BioNetMX 2020.
The Workshop and Tutorial sessions aim to provide an opportunity to discuss current and emergent topics on Bioinformatics and Computational Biology. These sessions can be both 8 hour sessions over the course of both days or 4 hour sessions on one day and will take place on the 26th or 27th of October 2020.
Workshop and tutorials will be held in a virtual training environment. Workshop and tutorial leaders should be prepared to teach using online tools such as Zoom.
We will host up to four simultaneous Workshops or Tutorials.
Proposals should contain the necessary information for reviewers to judge the importance, quality and community interest in the proposed topic. Each proposed event should have one or more designated organizers and a program. The proposal should contain the following information:
Please submit your workshop proposals via the online form.
Deadline for submissions: July 30th, 2020
Notification of decision: August 15th, 2020
The GCRF-funded CABANA project is delighted to offer registration waiver fellowships for researchers to attend the ISCB-LA SoIBio BioNetMX Symposium. The fellowships are open to scientists at any stage of their career. Early-stage researchers and researchers from minority groups are especially encouraged to apply.
Your place of work must be a Latin American country.
You must register to attend at least one tutorial/workshop and the main conference.
You must present a poster or a talk to remain eligible.
Before applying for a travel fellowship;
Deadline for applications is Midnight UTC on September 30th.
The city has an international airport with daily flights from Atlanta, Huston, Dallas, and L.A, plus many national routes.
Moreover, there is a bus service every hour from the airport in Mexico City to Queretaro.
Queretaro is well connected to other regions within Mexico through bus services.
We will provide daily transport service with no extra cost (first come first served) for up to 50 people from Queretaro downtown for the duration of the conference.
For transport within the city, we recommend using Uber. The usual cost from downtown to Juriquilla is $150-$200 MXN.
The transport bus service is also recommended. A card can be purchased on any OXXO store (there is always one around the corner), the card is rechargeable. Bus service lines are available, an App is also available “Transporte Público Querétaro”.
ISCB Members enjoy discounts on conference registration (up to $150), journal subscriptions, book (25% off), and job center postings (free).
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